BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D07SP1|AL426027
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1339 1596 0.0
>3x_Contig1339
Length = 6194
Score = 1596 bits (805), Expect = 0.0
Identities = 805/805 (100%)
Strand = Plus / Minus
Query: 1 cgatcaatgaattcatttcattttcgaacgcgatgtcaaagaatccatactctgagtcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 cgatcaatgaattcatttcattttcgaacgcgatgtcaaagaatccatactctgagtcgg 4524
Query: 61 tacgcaaattcccaatgtccttgaccatttcttcggcccattctttcaagttatagagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 tacgcaaattcccaatgtccttgaccatttcttcggcccattctttcaagttatagagtc 4464
Query: 121 ttagaatagcagcattagcattagattcatccaagttggcatcttcaacagtgtcacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 ttagaatagcagcattagcattagattcatccaagttggcatcttcaacagtgtcacctg 4404
Query: 181 catcagcaagagcaatacgggaagcatcggcaccgaatttcgtcaccatgtcgtgcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4403 catcagcaagagcaatacgggaagcatcggcaccgaatttcgtcaccatgtcgtgcaaag 4344
Query: 241 tcatgaagttacctgtagacttggacatcttagcattgttcaacatcaaatgaccgttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4343 tcatgaagttacctgtagacttggacatcttagcattgttcaacatcaaatgaccgttga 4284
Query: 301 ctctgataccctttggccagaactttcttgggaacaatgcaacgtgagtgtagataaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4283 ctctgataccctttggccagaactttcttgggaacaatgcaacgtgagtgtagataaaga 4224
Query: 361 aggtcaagtggtttggaatcaaatccttaccagaaatggaaacatccaatgggtagaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 aggtcaagtggtttggaatcaaatccttaccagaaatggaaacatccaatgggtagaagt 4164
Query: 421 attcgaactctcttctcaatttttgcaaagattctaatgggatatcagtgtttttcactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 attcgaactctcttctcaatttttgcaaagattctaatgggatatcagtgtttttcactt 4104
Query: 481 catcgacgtgttggaagacatagtcaaacacttcatctgtcatttgttctgctttgattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4103 catcgacgtgttggaagacatagtcaaacacttcatctgtcatttgttctgctttgattc 4044
Query: 541 ccaatggaccaatttcgttaccgtagtaatctttgaataataaatgcgcaatggtataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 ccaatggaccaatttcgttaccgtagtaatctttgaataataaatgcgcaatggtataga 3984
Query: 601 aggattggtagatagtagagtcagacaaagattcaaccaaatactttggatcccatggta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 aggattggtagatagtagagtcagacaaagattcaaccaaatactttggatcccatggta 3924
Query: 661 atctggtacctagaccgtaactacgagaaacagcccagtttctcaaccaatctaagacac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 atctggtacctagaccgtaactacgagaaacagcccagtttctcaaccaatctaagacac 3864
Query: 721 tttcgaaggcattcttaacttcaggagcaaagagttccataccttccaaacattcaatag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 tttcgaaggcattcttaacttcaggagcaaagagttccataccttccaaacattcaatag 3804
Query: 781 cttgtttcttccattcttcttcacc 805
|||||||||||||||||||||||||
Sbjct: 3803 cttgtttcttccattcttcttcacc 3779
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6881
Number of Sequences: 1807
Number of extensions: 6881
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)